Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Cog3-203ENSMUST00000227473 4197 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Clk1P22518 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.84□□□□□ -0.67
Clk1P22518 Gm25700-201ENSMUST00000177693 110 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Gm43184-201ENSMUST00000197247 542 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Gm18038-201ENSMUST00000197900 485 ntBASIC10.84□□□□□ -0.67
Clk1P22518 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Gm4157-201ENSMUST00000211647 679 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Gm5705-201ENSMUST00000066241 711 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Clk1P22518 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Clk1P22518 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
Clk1P22518 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.83□□□□□ -0.68
Clk1P22518 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Clk1P22518 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Clk1P22518 Mir877-201ENSMUST00000104738 85 ntBASIC10.83□□□□□ -0.68
Clk1P22518 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.83□□□□□ -0.68
Clk1P22518 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Gm45433-201ENSMUST00000209386 247 ntBASIC10.83□□□□□ -0.68
Clk1P22518 Gm8913-201ENSMUST00000209491 641 ntBASIC10.83□□□□□ -0.68
Clk1P22518 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.83□□□□□ -0.68
Clk1P22518 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Clk1P22518 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms