Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
TP20293 Gm28450-201ENSMUST00000187349 638 ntBASIC10.87□□□□□ -0.67
TP20293 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.87□□□□□ -0.67
TP20293 Gm2965-201ENSMUST00000198365 343 ntBASIC10.87□□□□□ -0.67
TP20293 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.87□□□□□ -0.67
TP20293 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.87□□□□□ -0.67
TP20293 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.87□□□□□ -0.67
TP20293 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.87□□□□□ -0.67
TP20293 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.87□□□□□ -0.67
TP20293 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.87□□□□□ -0.67
TP20293 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.87□□□□□ -0.67
TP20293 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TP20293 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.86□□□□□ -0.67
TP20293 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TP20293 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.86□□□□□ -0.67
TP20293 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.86□□□□□ -0.67
TP20293 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.86□□□□□ -0.67
TP20293 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TP20293 Gm23200-201ENSMUST00000104379 132 ntBASIC10.86□□□□□ -0.67
TP20293 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.86□□□□□ -0.67
TP20293 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.86□□□□□ -0.67
TP20293 Gm8100-201ENSMUST00000182906 988 ntBASIC10.86□□□□□ -0.67
TP20293 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TP20293 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.86□□□□□ -0.67
TP20293 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
TP20293 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.86□□□□□ -0.67
TP20293 Gm38117-201ENSMUST00000194653 939 ntBASIC10.86□□□□□ -0.67
TP20293 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Gm4482-201ENSMUST00000200876 742 ntBASIC10.86□□□□□ -0.67
TP20293 Gm6450-201ENSMUST00000200896 574 ntBASIC10.86□□□□□ -0.67
TP20293 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.86□□□□□ -0.67
TP20293 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.86□□□□□ -0.67
TP20293 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.86□□□□□ -0.67
TP20293 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TP20293 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Gm21811-201ENSMUST00000096485 930 ntBASIC10.86□□□□□ -0.67
TP20293 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.86□□□□□ -0.67
TP20293 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TP20293 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
TP20293 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TP20293 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TP20293 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TP20293 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.86□□□□□ -0.67
TP20293 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TP20293 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TP20293 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TP20293 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.85□□□□□ -0.67
TP20293 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TP20293 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Gm11663-201ENSMUST00000117888 290 ntBASIC10.85□□□□□ -0.67
TP20293 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.85□□□□□ -0.67
TP20293 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Gm23085-201ENSMUST00000157849 293 ntBASIC10.85□□□□□ -0.67
TP20293 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.85□□□□□ -0.67
TP20293 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms