Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ccl3P10855 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm12389-201ENSMUST00000117696 418 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Gm9133-201ENSMUST00000118289 540 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Gm12712-201ENSMUST00000120676 801 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccl3P10855 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm18801-201ENSMUST00000186616 536 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Gm42660-201ENSMUST00000197733 947 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.14□□□□□ -0.79
Ccl3P10855 BC106175-202ENSMUST00000219344 1213 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Capsl-202ENSMUST00000226688 739 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl3P10855 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccl3P10855 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.14□□□□□ -0.79
Ccl3P10855 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Gm11996-201ENSMUST00000117538 915 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Gm14165-201ENSMUST00000121456 952 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Gm9507-202ENSMUST00000180157 654 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Gm34379-201ENSMUST00000195036 290 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Gm29763-201ENSMUST00000205306 616 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Gm9487-201ENSMUST00000216600 472 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms