Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm11660-201ENSMUST00000120955 412 ntBASIC10.88□□□□□ -0.67
ApoeP08226 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.88□□□□□ -0.67
ApoeP08226 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.88□□□□□ -0.67
ApoeP08226 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Mir8093-201ENSMUST00000185043 137 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm28937-201ENSMUST00000185413 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm29400-201ENSMUST00000187208 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm28662-201ENSMUST00000188446 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Gm28251-201ENSMUST00000188835 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Gm37318-201ENSMUST00000194325 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm38017-201ENSMUST00000194768 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm37287-201ENSMUST00000195449 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm37793-201ENSMUST00000195548 695 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm37008-201ENSMUST00000195712 319 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
ApoeP08226 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
ApoeP08226 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.87□□□□□ -0.67
ApoeP08226 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
ApoeP08226 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
ApoeP08226 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.87□□□□□ -0.67
ApoeP08226 Gm5982-201ENSMUST00000196234 512 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
ApoeP08226 Gm6450-201ENSMUST00000200896 574 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Gm19187-201ENSMUST00000206781 892 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm6013-201ENSMUST00000212264 699 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
ApoeP08226 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.87□□□□□ -0.67
ApoeP08226 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.87□□□□□ -0.67
ApoeP08226 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ApoeP08226 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ApoeP08226 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms