Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.27□□□□□ -0.77
P06344 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.27□□□□□ -0.77
P06344 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.27□□□□□ -0.77
P06344 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.27□□□□□ -0.77
P06344 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.26□□□□□ -0.77
P06344 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.26□□□□□ -0.77
P06344 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P06344 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
P06344 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
P06344 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P06344 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
P06344 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.26□□□□□ -0.77
P06344 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
P06344 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.26□□□□□ -0.77
P06344 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
P06344 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P06344 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
P06344 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.26□□□□□ -0.77
P06344 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06344 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
P06344 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
P06344 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.25□□□□□ -0.77
P06344 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
P06344 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
P06344 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P06344 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Gm11246-201ENSMUST00000120880 345 ntBASIC10.25□□□□□ -0.77
P06344 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
P06344 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.25□□□□□ -0.77
P06344 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Gm38314-201ENSMUST00000195709 625 ntBASIC10.25□□□□□ -0.77
P06344 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.25□□□□□ -0.77
P06344 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.25□□□□□ -0.77
P06344 Gm29787-201ENSMUST00000222129 849 ntBASIC10.25□□□□□ -0.77
P06344 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.25□□□□□ -0.77
P06344 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P06344 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.25□□□□□ -0.77
P06344 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms