Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Gm14021-201ENSMUST00000117683 961 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Gm8302-201ENSMUST00000119217 852 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Gm25154-201ENSMUST00000157123 119 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Gm8707-201ENSMUST00000183325 980 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Gm37597-201ENSMUST00000191853 382 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc188F6WEU2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm28671-201ENSMUST00000187036 692 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm9409-201ENSMUST00000197017 316 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc188F6WEU2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms