Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Ccdc149F6V035 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.72□□□□□ -0.53
Ccdc149F6V035 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc149F6V035 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.71□□□□□ -0.53
Ccdc149F6V035 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm13422-201ENSMUST00000118834 504 ntBASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm12274-201ENSMUST00000120062 385 ntBASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm15744-201ENSMUST00000161734 213 ntBASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm20495-201ENSMUST00000173902 235 ntBASIC11.71□□□□□ -0.53
Ccdc149F6V035 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm5100-201ENSMUST00000195631 589 ntBASIC11.71□□□□□ -0.53
Ccdc149F6V035 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc149F6V035 Rgr-203ENSMUST00000225070 4704 ntBASIC11.71□□□□□ -0.54
Ccdc149F6V035 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc149F6V035 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Ccdc149F6V035 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc149F6V035 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Mir6407-201ENSMUST00000184510 101 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gm9139-201ENSMUST00000218817 700 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.7□□□□□ -0.54
Ccdc149F6V035 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms