Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Gm13461-201ENSMUST00000120980 662 ntBASIC11.75□□□□□ -0.53
Tubb1A2AQ07 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Gm10288-201ENSMUST00000084614 537 ntBASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb1A2AQ07 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Mir877-201ENSMUST00000104738 85 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm2260-201ENSMUST00000184965 657 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm4857-201ENSMUST00000192718 785 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm18730-201ENSMUST00000218038 343 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gm21811-201ENSMUST00000096485 930 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb1A2AQ07 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.73□□□□□ -0.53
Tubb1A2AQ07 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm25148-201ENSMUST00000104611 123 ntBASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm13916-201ENSMUST00000117368 628 ntBASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm15374-201ENSMUST00000119313 844 ntBASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.73□□□□□ -0.53
Tubb1A2AQ07 Gm15595-201ENSMUST00000120840 961 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms