Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gm13035-201ENSMUST00000117496 342 ntBASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gm11450-201ENSMUST00000121144 333 ntBASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gm7150-201ENSMUST00000122032 981 ntBASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb2S4R1M3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm23200-201ENSMUST00000104379 132 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm14058-201ENSMUST00000116082 735 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm7851-201ENSMUST00000117574 323 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm12997-201ENSMUST00000120207 640 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm29499-201ENSMUST00000189151 486 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm28329-201ENSMUST00000191208 689 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm29171-201ENSMUST00000191397 486 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms