Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm12501-201ENSMUST00000119163 529 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm15207-201ENSMUST00000119259 442 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm4310-201ENSMUST00000177847 889 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm16505-201ENSMUST00000179981 232 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm8100-201ENSMUST00000182906 988 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm27552-201ENSMUST00000183351 62 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm27844-201ENSMUST00000183613 62 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm28686-201ENSMUST00000187404 609 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm38117-201ENSMUST00000194653 939 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm6450-201ENSMUST00000200896 574 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 CT009495.1-201ENSMUST00000224221 862 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm4909-201ENSMUST00000118749 794 ntBASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm8815-201ENSMUST00000173809 620 ntBASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm38314-201ENSMUST00000195709 625 ntBASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm4482-201ENSMUST00000200876 742 ntBASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf40aQ9R1C7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm26047-201ENSMUST00000157308 113 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm18734-201ENSMUST00000172937 808 ntBASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prpf40aQ9R1C7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms