Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm43124-201ENSMUST00000201878 278 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm9797-202ENSMUST00000218003 294 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm807-202ENSMUST00000224929 408 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm45132-201ENSMUST00000207234 2542 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm7857-201ENSMUST00000117957 358 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm17040-202ENSMUST00000170597 889 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm45276-201ENSMUST00000209549 1086 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm5363-201ENSMUST00000211927 938 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim33Q99PP7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.56□□□□□ -0.56
Trim33Q99PP7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim33Q99PP7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim33Q99PP7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.55□□□□□ -0.56
Trim33Q99PP7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.55□□□□□ -0.56
Trim33Q99PP7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim33Q99PP7 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim33Q99PP7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms