Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Gm40414-201ENSMUST00000197608 481 ntBASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Paupar-201ENSMUST00000194826 3482 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 AA623943-201ENSMUST00000121794 354 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm13857-201ENSMUST00000139645 173 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm6686-201ENSMUST00000178455 258 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Mir8111-201ENSMUST00000184463 137 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm5190-201ENSMUST00000192434 357 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm8730-201ENSMUST00000076373 954 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh15Q99PJ1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh15Q99PJ1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms