Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.85□□□□□ -0.67
Nkd1Q99MH6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkd1Q99MH6 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm22133-201ENSMUST00000102082 109 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm26286-201ENSMUST00000104166 134 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm45865-201ENSMUST00000211815 945 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkd1Q99MH6 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.84□□□□□ -0.67
Nkd1Q99MH6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm14381-201ENSMUST00000122105 414 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm28937-201ENSMUST00000185413 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm29400-201ENSMUST00000187208 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm28662-201ENSMUST00000188446 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm28251-201ENSMUST00000188835 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm37318-201ENSMUST00000194325 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm38017-201ENSMUST00000194768 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm37287-201ENSMUST00000195449 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm37793-201ENSMUST00000195548 695 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm44364-201ENSMUST00000198368 141 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkd1Q99MH6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms