Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RtcbQ99LF4 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RtcbQ99LF4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RtcbQ99LF4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RtcbQ99LF4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RtcbQ99LF4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RtcbQ99LF4 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RtcbQ99LF4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RtcbQ99LF4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RtcbQ99LF4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RtcbQ99LF4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RtcbQ99LF4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RtcbQ99LF4 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RtcbQ99LF4 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.21□□□□□ -0.14
RtcbQ99LF4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RtcbQ99LF4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.2□□□□□ -0.14
RtcbQ99LF4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm15136-201ENSMUST00000120552 533 ntBASIC14.2□□□□□ -0.14
RtcbQ99LF4 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.2□□□□□ -0.14
RtcbQ99LF4 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC14.2□□□□□ -0.14
RtcbQ99LF4 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm42599-201ENSMUST00000201308 469 ntBASIC14.2□□□□□ -0.14
RtcbQ99LF4 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.2□□□□□ -0.14
RtcbQ99LF4 Paupar-201ENSMUST00000194826 3482 ntBASIC14.2□□□□□ -0.14
RtcbQ99LF4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RtcbQ99LF4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gm24279-201ENSMUST00000104236 131 ntBASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gm25569-201ENSMUST00000157175 131 ntBASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gm42511-201ENSMUST00000196160 234 ntBASIC14.19□□□□□ -0.14
RtcbQ99LF4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.19□□□□□ -0.14
RtcbQ99LF4 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RtcbQ99LF4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RtcbQ99LF4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms