Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm13263-201ENSMUST00000121271 838 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm28686-201ENSMUST00000187404 609 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm42997-202ENSMUST00000200321 985 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm5369-201ENSMUST00000217499 588 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Ntng1-201ENSMUST00000051253 327 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.4□□□□□ -0.59
Pcdhga4Q91XY4 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm37444-201ENSMUST00000193605 439 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm1821-202ENSMUST00000227415 750 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.39□□□□□ -0.59
Pcdhga4Q91XY4 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.38□□□□□ -0.59
Pcdhga4Q91XY4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga4Q91XY4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga4Q91XY4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Pcdhga4Q91XY4 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga4Q91XY4 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga4Q91XY4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms