Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cnot3Q8K0V4 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm18187-201ENSMUST00000196476 984 ntBASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm43118-201ENSMUST00000199149 775 ntBASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cnot3Q8K0V4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cnot3Q8K0V4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cnot3Q8K0V4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cnot3Q8K0V4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cnot3Q8K0V4 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cnot3Q8K0V4 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cnot3Q8K0V4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.77□□□□□ -0.68
Cnot3Q8K0V4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cnot3Q8K0V4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms