Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Mir8109-201ENSMUST00000184375 117 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm29615-201ENSMUST00000185371 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm28224-201ENSMUST00000186078 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm29001-201ENSMUST00000186177 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm28292-201ENSMUST00000186593 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm28101-201ENSMUST00000187608 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm29076-201ENSMUST00000187689 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm28302-201ENSMUST00000187931 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm28646-201ENSMUST00000188220 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm28205-201ENSMUST00000189177 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm29032-201ENSMUST00000189797 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm28695-201ENSMUST00000190300 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm37448-201ENSMUST00000192795 697 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm38266-201ENSMUST00000194931 421 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm18038-201ENSMUST00000197900 485 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm24255-201ENSMUST00000104481 128 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm5714-201ENSMUST00000197343 566 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.25□□□□□ -0.77
ShfQ8CG80 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.25□□□□□ -0.77
ShfQ8CG80 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
ShfQ8CG80 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
ShfQ8CG80 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ShfQ8CG80 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
ShfQ8CG80 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
ShfQ8CG80 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ShfQ8CG80 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ShfQ8CG80 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms