Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
E4f1Q8CCE9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm15207-201ENSMUST00000119259 442 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm16071-201ENSMUST00000119589 793 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm8492-201ENSMUST00000182375 987 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm17826-201ENSMUST00000189720 798 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm44980-201ENSMUST00000205826 314 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
E4f1Q8CCE9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm4310-201ENSMUST00000177847 889 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm4654-201ENSMUST00000183305 982 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm29499-201ENSMUST00000189151 486 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm28329-201ENSMUST00000191208 689 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm29171-201ENSMUST00000191397 486 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm43520-201ENSMUST00000197996 164 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Gm6867-201ENSMUST00000219165 425 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.56□□□□□ -0.24
E4f1Q8CCE9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms