Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm29199-201ENSMUST00000187766 775 ntBASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm25732-201ENSMUST00000175168 60 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Mir6927-201ENSMUST00000184494 71 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm37246-201ENSMUST00000192665 835 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm6722-201ENSMUST00000221586 390 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trub1Q8C0D0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm23251-201ENSMUST00000103773 110 ntBASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm12407-201ENSMUST00000180219 324 ntBASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.85□□□□□ -0.51
Trub1Q8C0D0 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms