Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm9139-201ENSMUST00000218817 700 ntBASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm16219-201ENSMUST00000120096 274 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm26134-201ENSMUST00000178484 110 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm23694-201ENSMUST00000179335 110 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm37284-201ENSMUST00000193607 539 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm6722-201ENSMUST00000221586 390 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm10263-201ENSMUST00000085163 300 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sh3rf2Q8BZT2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm11675-201ENSMUST00000121873 832 ntBASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh3rf2Q8BZT2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms