Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Mir6420-201ENSMUST00000185032 102 ntBASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm5982-201ENSMUST00000196234 512 ntBASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm43962-201ENSMUST00000203898 190 ntBASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm15276-201ENSMUST00000145953 498 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm17376-201ENSMUST00000166016 84 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm4310-201ENSMUST00000177847 889 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm28937-201ENSMUST00000185413 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm29400-201ENSMUST00000187208 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm28662-201ENSMUST00000188446 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm28251-201ENSMUST00000188835 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm37318-201ENSMUST00000194325 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm38017-201ENSMUST00000194768 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm37287-201ENSMUST00000195449 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm37793-201ENSMUST00000195548 695 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm38317-201ENSMUST00000195564 343 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm5705-201ENSMUST00000066241 711 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms