Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim65Q8BFW4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim65Q8BFW4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim65Q8BFW4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim65Q8BFW4 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim65Q8BFW4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim65Q8BFW4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm11941-201ENSMUST00000119904 610 ntBASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm7150-201ENSMUST00000122032 981 ntBASIC12.33□□□□□ -0.44
Trim65Q8BFW4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm29499-201ENSMUST00000189151 486 ntBASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm28329-201ENSMUST00000191208 689 ntBASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm29171-201ENSMUST00000191397 486 ntBASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trim65Q8BFW4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Gm23251-201ENSMUST00000103773 110 ntBASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.32□□□□□ -0.44
Trim65Q8BFW4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Gm44008-201ENSMUST00000204345 412 ntBASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Gm6905-201ENSMUST00000205729 511 ntBASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trim65Q8BFW4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Gm3150-201ENSMUST00000166418 204 ntBASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.31□□□□□ -0.44
Trim65Q8BFW4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Gm1821-202ENSMUST00000227415 750 ntBASIC12.31□□□□□ -0.44
Trim65Q8BFW4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 2679.5 ms