Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm3329-201ENSMUST00000159873 556 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Gm37301-201ENSMUST00000195412 568 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Gm5035-201ENSMUST00000215581 927 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Gm18065-201ENSMUST00000221395 526 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Gm37003-201ENSMUST00000194702 2827 ntBASIC12.24□□□□□ -0.45
CtifQ6PEE2 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.24□□□□□ -0.45
CtifQ6PEE2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.24□□□□□ -0.45
CtifQ6PEE2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.24□□□□□ -0.45
CtifQ6PEE2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.24□□□□□ -0.45
CtifQ6PEE2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.24□□□□□ -0.45
CtifQ6PEE2 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CtifQ6PEE2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.23□□□□□ -0.45
CtifQ6PEE2 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.23□□□□□ -0.45
CtifQ6PEE2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.23□□□□□ -0.45
CtifQ6PEE2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.23□□□□□ -0.45
CtifQ6PEE2 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.23□□□□□ -0.45
CtifQ6PEE2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.23□□□□□ -0.45
CtifQ6PEE2 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CtifQ6PEE2 Gm7103-201ENSMUST00000195642 1852 ntBASIC12.23□□□□□ -0.45
CtifQ6PEE2 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CtifQ6PEE2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms