Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm26875-201ENSMUST00000181006 950 ntBASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm7741-201ENSMUST00000181445 989 ntBASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Gm7504-201ENSMUST00000201449 424 ntBASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc85bQ6PDY0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Gm14497-201ENSMUST00000119537 580 ntBASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Gm25554-201ENSMUST00000158075 113 ntBASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc85bQ6PDY0 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms