Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Mir8109-201ENSMUST00000184375 117 ntBASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Gm18065-201ENSMUST00000221395 526 ntBASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd3Q6P9Z1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Rps4l-202ENSMUST00000204242 789 ntBASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smarcd3Q6P9Z1 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms