Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.58□□□□□ -0.4
Smchd1Q6P5D8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smchd1Q6P5D8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smchd1Q6P5D8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smchd1Q6P5D8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smchd1Q6P5D8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gm10169-201ENSMUST00000121822 348 ntBASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gm18514-201ENSMUST00000218980 436 ntBASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smchd1Q6P5D8 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm12990-201ENSMUST00000120372 468 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm13117-201ENSMUST00000120894 691 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm12628-201ENSMUST00000122193 382 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm29067-201ENSMUST00000190821 470 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm34379-201ENSMUST00000195036 290 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smchd1Q6P5D8 Gm14807-201ENSMUST00000116640 983 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms