Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Gm5733-201ENSMUST00000190232 939 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.08□□□□□ -0.64
ClpbQ60649 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
ClpbQ60649 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
ClpbQ60649 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Rgr-203ENSMUST00000225070 4704 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ClpbQ60649 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
ClpbQ60649 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm12165-201ENSMUST00000117047 342 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm15207-201ENSMUST00000119259 442 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm15432-201ENSMUST00000121106 195 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm8199-201ENSMUST00000121323 823 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm23699-201ENSMUST00000158835 135 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm8815-201ENSMUST00000173809 620 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ClpbQ60649 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ClpbQ60649 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.07□□□□□ -0.64
ClpbQ60649 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm37246-201ENSMUST00000192665 835 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm43947-201ENSMUST00000203019 959 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.07□□□□□ -0.64
ClpbQ60649 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ClpbQ60649 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
ClpbQ60649 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.07□□□□□ -0.64
ClpbQ60649 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ClpbQ60649 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ClpbQ60649 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
ClpbQ60649 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.06□□□□□ -0.64
ClpbQ60649 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ClpbQ60649 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms