Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.99□□□□□ -0.65
Nr1h4Q60641 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.99□□□□□ -0.65
Nr1h4Q60641 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm5455-201ENSMUST00000058710 715 ntBASIC10.99□□□□□ -0.65
Nr1h4Q60641 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm17980-201ENSMUST00000217977 2349 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm13829-201ENSMUST00000119600 138 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm6963-201ENSMUST00000147879 379 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm29396-201ENSMUST00000185659 716 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm30285-201ENSMUST00000214614 422 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.98□□□□□ -0.65
Nr1h4Q60641 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nr1h4Q60641 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm26286-201ENSMUST00000104166 134 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms