Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm13035-201ENSMUST00000117496 342 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm24990-201ENSMUST00000157406 323 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm27341-201ENSMUST00000183570 106 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm29499-201ENSMUST00000189151 486 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm5733-201ENSMUST00000190232 939 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm28329-201ENSMUST00000191208 689 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm29171-201ENSMUST00000191397 486 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf20Q5DTM8 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf20Q5DTM8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf20Q5DTM8 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.71□□□□□ -0.22
Rnf20Q5DTM8 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf20Q5DTM8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf20Q5DTM8 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf20Q5DTM8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf20Q5DTM8 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Gm12579-201ENSMUST00000118040 783 ntBASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Gm11450-201ENSMUST00000121144 333 ntBASIC13.7□□□□□ -0.22
Rnf20Q5DTM8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms