Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm42454-201ENSMUST00000196805 1181 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm43629-201ENSMUST00000201782 704 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm8637-201ENSMUST00000212919 1085 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 AC153526.1-201ENSMUST00000219750 190 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm5194-201ENSMUST00000221457 742 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm14943-201ENSMUST00000118056 546 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.73□□□□□ -0.53
Col9a1Q05722 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.73□□□□□ -0.53
Col9a1Q05722 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm16129-201ENSMUST00000152628 486 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm7805-201ENSMUST00000154348 448 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm25569-201ENSMUST00000157175 131 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm16030-201ENSMUST00000159098 603 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Col9a1Q05722 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm37826-201ENSMUST00000195329 322 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm5714-201ENSMUST00000197343 566 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm43106-201ENSMUST00000199485 637 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm42733-201ENSMUST00000201272 519 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm20274-201ENSMUST00000206967 584 ntBASIC11.73□□□□□ -0.53
Col9a1Q05722 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col9a1Q05722 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC11.73□□□□□ -0.53
Col9a1Q05722 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms