Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1sQ02789 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Gm13857-201ENSMUST00000139645 173 ntBASIC14.27□□□□□ -0.13
Cacna1sQ02789 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Gm27833-201ENSMUST00000184285 124 ntBASIC14.27□□□□□ -0.13
Cacna1sQ02789 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Gm18391-201ENSMUST00000217189 658 ntBASIC14.27□□□□□ -0.13
Cacna1sQ02789 CU025215.1-201ENSMUST00000222986 603 ntBASIC14.27□□□□□ -0.13
Cacna1sQ02789 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Gm29101-201ENSMUST00000188329 1471 ntBASIC14.27□□□□□ -0.13
Cacna1sQ02789 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1sQ02789 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 AC154197.1-201ENSMUST00000225136 1382 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Mir7088-201ENSMUST00000184227 86 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm34248-201ENSMUST00000200027 474 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm8162-201ENSMUST00000213951 665 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 AC154433.1-201ENSMUST00000224401 1183 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.26□□□□□ -0.13
Cacna1sQ02789 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1sQ02789 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm44173-201ENSMUST00000204316 132 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm8557-201ENSMUST00000220777 475 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 AC159006.3-201ENSMUST00000226918 664 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 AC123061.1-201ENSMUST00000228021 999 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm12716-201ENSMUST00000120606 1354 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm24346-201ENSMUST00000158712 194 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 Mir3091-201ENSMUST00000175086 76 ntBASIC14.25□□□□□ -0.13
Cacna1sQ02789 Gm4960-201ENSMUST00000182928 1001 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms