Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
GabpaQ00422 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GabpaQ00422 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GabpaQ00422 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.06□□□□□ -0.32
GabpaQ00422 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.06□□□□□ -0.32
GabpaQ00422 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
GabpaQ00422 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
GabpaQ00422 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
GabpaQ00422 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm8111-201ENSMUST00000117659 987 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Gm12274-201ENSMUST00000120062 385 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm24992-201ENSMUST00000157412 130 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm44008-201ENSMUST00000204345 412 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Gm45120-201ENSMUST00000208880 408 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
GabpaQ00422 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Lect2-202ENSMUST00000225183 823 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm5805-201ENSMUST00000072779 456 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GabpaQ00422 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.05□□□□□ -0.32
GabpaQ00422 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.05□□□□□ -0.32
GabpaQ00422 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GabpaQ00422 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.04□□□□□ -0.32
GabpaQ00422 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
GabpaQ00422 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
GabpaQ00422 Gm30946-201ENSMUST00000198288 724 ntBASIC13.04□□□□□ -0.32
GabpaQ00422 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.04□□□□□ -0.32
GabpaQ00422 Gm45856-201ENSMUST00000212752 416 ntBASIC13.04□□□□□ -0.32
GabpaQ00422 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.04□□□□□ -0.32
GabpaQ00422 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.04□□□□□ -0.32
GabpaQ00422 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
GabpaQ00422 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GabpaQ00422 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms