Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm7504-201ENSMUST00000201449 424 ntBASIC12.53□□□□□ -0.4
Trim43cP86449 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.53□□□□□ -0.4
Trim43cP86449 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim43cP86449 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.53□□□□□ -0.4
Trim43cP86449 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43cP86449 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim43cP86449 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43cP86449 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43cP86449 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim43cP86449 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.52□□□□□ -0.4
Trim43cP86449 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43cP86449 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.52□□□□□ -0.4
Trim43cP86449 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trim43cP86449 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43cP86449 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.52□□□□□ -0.41
Trim43cP86449 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.52□□□□□ -0.41
Trim43cP86449 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim43cP86449 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trim43cP86449 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim43cP86449 Mir8115-201ENSMUST00000184992 119 ntBASIC12.52□□□□□ -0.41
Trim43cP86449 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim43cP86449 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.52□□□□□ -0.41
Trim43cP86449 Gm1821-202ENSMUST00000227415 750 ntBASIC12.52□□□□□ -0.41
Trim43cP86449 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim43cP86449 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.52□□□□□ -0.41
Trim43cP86449 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim43cP86449 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim43cP86449 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43cP86449 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim43cP86449 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Gm4294-201ENSMUST00000105169 614 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Gm16166-201ENSMUST00000118291 787 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Gm26047-201ENSMUST00000157308 113 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim43cP86449 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Gm37466-201ENSMUST00000195692 652 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Gm26047-202ENSMUST00000198840 115 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim43cP86449 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trim43cP86449 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim43cP86449 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms