Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.35□□□□□ -0.75
SgcbP82349 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SgcbP82349 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcbP82349 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Gm12579-201ENSMUST00000118040 783 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Gm18595-201ENSMUST00000175736 1068 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Gm17790-201ENSMUST00000191545 1228 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SgcbP82349 Gm5982-201ENSMUST00000196234 512 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Gm44100-201ENSMUST00000204329 436 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.34□□□□□ -0.75
SgcbP82349 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Gm45113-201ENSMUST00000207518 165 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Gm6867-201ENSMUST00000219165 425 ntBASIC10.34□□□□□ -0.75
SgcbP82349 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SgcbP82349 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
SgcbP82349 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.34□□□□□ -0.75
SgcbP82349 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcbP82349 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.75
SgcbP82349 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SgcbP82349 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.33□□□□□ -0.76
SgcbP82349 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Gm13045-201ENSMUST00000119019 712 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Gm13408-201ENSMUST00000119822 798 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Gm13935-201ENSMUST00000121859 798 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.33□□□□□ -0.76
SgcbP82349 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.33□□□□□ -0.76
SgcbP82349 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 Gm34272-201ENSMUST00000208886 253 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Gm8959-201ENSMUST00000213150 571 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Gm5178-201ENSMUST00000219380 898 ntBASIC10.33□□□□□ -0.76
SgcbP82349 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms