Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcr4P70658 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcr4P70658 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcr4P70658 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcr4P70658 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcr4P70658 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcr4P70658 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.81□□□□□ -0.68
Cxcr4P70658 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Gm23200-201ENSMUST00000104379 132 ntBASIC10.81□□□□□ -0.68
Cxcr4P70658 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Mir3102-201ENSMUST00000175555 104 ntBASIC10.81□□□□□ -0.68
Cxcr4P70658 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.81□□□□□ -0.68
Cxcr4P70658 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.81□□□□□ -0.68
Cxcr4P70658 Gm43184-201ENSMUST00000197247 542 ntBASIC10.81□□□□□ -0.68
Cxcr4P70658 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.81□□□□□ -0.68
Cxcr4P70658 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.81□□□□□ -0.68
Cxcr4P70658 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcr4P70658 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcr4P70658 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cxcr4P70658 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Mir5120-201ENSMUST00000175020 78 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm27552-201ENSMUST00000183351 62 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm27844-201ENSMUST00000183613 62 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm270-201ENSMUST00000223010 976 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Cxcr4P70658 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.8□□□□□ -0.68
Cxcr4P70658 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcr4P70658 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms