Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm24548-201ENSMUST00000158650 108 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Shox2P70390 Gm8652-201ENSMUST00000181363 964 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Mir6956-201ENSMUST00000183598 62 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Mir8093-201ENSMUST00000185043 137 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.34□□□□□ -0.59
Shox2P70390 Gm38321-201ENSMUST00000195053 235 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shox2P70390 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.34□□□□□ -0.59
Shox2P70390 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Shox2P70390 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shox2P70390 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Shox2P70390 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.34□□□□□ -0.59
Shox2P70390 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Shox2P70390 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Shox2P70390 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Shox2P70390 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shox2P70390 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Shox2P70390 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shox2P70390 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.33□□□□□ -0.6
Shox2P70390 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Shox2P70390 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Gm14071-201ENSMUST00000117817 509 ntBASIC11.33□□□□□ -0.6
Shox2P70390 Gm11814-201ENSMUST00000119515 929 ntBASIC11.33□□□□□ -0.6
Shox2P70390 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Shox2P70390 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Gm7809-201ENSMUST00000153199 742 ntBASIC11.33□□□□□ -0.6
Shox2P70390 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.33□□□□□ -0.6
Shox2P70390 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.33□□□□□ -0.6
Shox2P70390 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.33□□□□□ -0.6
Shox2P70390 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.33□□□□□ -0.6
Shox2P70390 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Shox2P70390 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shox2P70390 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.33□□□□□ -0.6
Shox2P70390 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Shox2P70390 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.33□□□□□ -0.6
Shox2P70390 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shox2P70390 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Shox2P70390 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.32□□□□□ -0.6
Shox2P70390 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.32□□□□□ -0.6
Shox2P70390 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.32□□□□□ -0.6
Shox2P70390 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Shox2P70390 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.32□□□□□ -0.6
Shox2P70390 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.32□□□□□ -0.6
Shox2P70390 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms