Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hmgb1P63158 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.73□□□□□ -0.37
Hmgb1P63158 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgb1P63158 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hmgb1P63158 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.72□□□□□ -0.37
Hmgb1P63158 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm11509-201ENSMUST00000117358 325 ntBASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.72□□□□□ -0.37
Hmgb1P63158 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm8913-201ENSMUST00000209491 641 ntBASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Erich3-203ENSMUST00000189969 3460 ntBASIC12.72□□□□□ -0.37
Hmgb1P63158 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgb1P63158 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Hmgb1P63158 Gm15398-202ENSMUST00000219998 1477 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgb1P63158 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hmgb1P63158 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hmgb1P63158 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Hmgb1P63158 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.71□□□□□ -0.37
Hmgb1P63158 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Gm43817-201ENSMUST00000196459 2262 ntBASIC12.71□□□□□ -0.37
Hmgb1P63158 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Hmgb1P63158 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Gm3329-201ENSMUST00000159873 556 ntBASIC12.71□□□□□ -0.37
Hmgb1P63158 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmgb1P63158 Gm28071-201ENSMUST00000190355 478 ntBASIC12.71□□□□□ -0.37
Hmgb1P63158 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hmgb1P63158 Gm9899-201ENSMUST00000065519 555 ntBASIC12.71□□□□□ -0.37
Hmgb1P63158 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgb1P63158 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hmgb1P63158 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hmgb1P63158 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.71□□□□□ -0.37
Hmgb1P63158 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgb1P63158 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Hmgb1P63158 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms