Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Nup43P59235 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.89□□□□□ -0.67
Nup43P59235 Gm13611-201ENSMUST00000118269 318 ntBASIC10.89□□□□□ -0.67
Nup43P59235 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.89□□□□□ -0.67
Nup43P59235 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.89□□□□□ -0.67
Nup43P59235 Gm10051-201ENSMUST00000145209 414 ntBASIC10.89□□□□□ -0.67
Nup43P59235 Gm20426-201ENSMUST00000173657 440 ntBASIC10.89□□□□□ -0.67
Nup43P59235 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.89□□□□□ -0.67
Nup43P59235 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.89□□□□□ -0.67
Nup43P59235 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.89□□□□□ -0.67
Nup43P59235 Mir7686-201ENSMUST00000200604 57 ntBASIC10.89□□□□□ -0.67
Nup43P59235 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.89□□□□□ -0.67
Nup43P59235 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.89□□□□□ -0.67
Nup43P59235 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.89□□□□□ -0.67
Nup43P59235 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup43P59235 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nup43P59235 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.89□□□□□ -0.67
Nup43P59235 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.88□□□□□ -0.67
Nup43P59235 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.88□□□□□ -0.67
Nup43P59235 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Nup43P59235 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.88□□□□□ -0.67
Nup43P59235 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.88□□□□□ -0.67
Nup43P59235 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Gm22144-201ENSMUST00000157402 102 ntBASIC10.88□□□□□ -0.67
Nup43P59235 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Nup43P59235 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.88□□□□□ -0.67
Nup43P59235 Gm18827-201ENSMUST00000188341 790 ntBASIC10.88□□□□□ -0.67
Nup43P59235 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.88□□□□□ -0.67
Nup43P59235 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Nup43P59235 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.88□□□□□ -0.67
Nup43P59235 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.88□□□□□ -0.67
Nup43P59235 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.88□□□□□ -0.67
Nup43P59235 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.88□□□□□ -0.67
Nup43P59235 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nup43P59235 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.88□□□□□ -0.67
Nup43P59235 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.88□□□□□ -0.67
Nup43P59235 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nup43P59235 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nup43P59235 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms