Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh6P54276 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.53□□□□□ -0.08
Msh6P54276 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Msh6P54276 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Gm14234-201ENSMUST00000119539 845 ntBASIC14.53□□□□□ -0.08
Msh6P54276 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC14.53□□□□□ -0.08
Msh6P54276 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.53□□□□□ -0.08
Msh6P54276 Gm24992-201ENSMUST00000157412 130 ntBASIC14.53□□□□□ -0.08
Msh6P54276 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.53□□□□□ -0.08
Msh6P54276 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.53□□□□□ -0.08
Msh6P54276 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Msh6P54276 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Msh6P54276 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.53□□□□□ -0.08
Msh6P54276 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Msh6P54276 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh6P54276 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.52□□□□□ -0.08
Msh6P54276 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC14.52□□□□□ -0.08
Msh6P54276 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.52□□□□□ -0.08
Msh6P54276 Olfml3-204ENSMUST00000169286 874 ntBASIC14.52□□□□□ -0.08
Msh6P54276 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.52□□□□□ -0.08
Msh6P54276 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.52□□□□□ -0.08
Msh6P54276 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.52□□□□□ -0.08
Msh6P54276 Gm44216-201ENSMUST00000203942 157 ntBASIC14.52□□□□□ -0.08
Msh6P54276 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.52□□□□□ -0.08
Msh6P54276 Gm45085-201ENSMUST00000209100 441 ntBASIC14.52□□□□□ -0.08
Msh6P54276 Gm26670-202ENSMUST00000226862 340 ntBASIC14.52□□□□□ -0.08
Msh6P54276 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh6P54276 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.52□□□□□ -0.09
Msh6P54276 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Msh6P54276 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Msh6P54276 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.52□□□□□ -0.09
Msh6P54276 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Msh6P54276 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.52□□□□□ -0.09
Msh6P54276 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.52□□□□□ -0.09
Msh6P54276 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Msh6P54276 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.52□□□□□ -0.09
Msh6P54276 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh6P54276 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Msh6P54276 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC14.51□□□□□ -0.09
Msh6P54276 Gm8111-201ENSMUST00000117659 987 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Gm14497-201ENSMUST00000119537 580 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Gm15620-201ENSMUST00000122949 270 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Gm25830-201ENSMUST00000158923 132 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Msh6P54276 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Msh6P54276 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Gm24328-201ENSMUST00000175104 67 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Mir7051-201ENSMUST00000184167 73 ntBASIC14.51□□□□□ -0.09
Msh6P54276 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Msh6P54276 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 176.1 ms