Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.75□□□□□ -0.53
SftpbP50405 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Gm24255-201ENSMUST00000104481 128 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.75□□□□□ -0.53
SftpbP50405 Gm14381-201ENSMUST00000122105 414 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.75□□□□□ -0.53
SftpbP50405 Gm15276-201ENSMUST00000145953 498 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Gm4310-201ENSMUST00000177847 889 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.75□□□□□ -0.53
SftpbP50405 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.75□□□□□ -0.53
SftpbP50405 Gm38117-201ENSMUST00000194653 939 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Gm38341-201ENSMUST00000195357 515 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Gm17827-201ENSMUST00000211825 742 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Gm9797-202ENSMUST00000218003 294 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SftpbP50405 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SftpbP50405 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SftpbP50405 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.75□□□□□ -0.53
SftpbP50405 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SftpbP50405 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.74□□□□□ -0.53
SftpbP50405 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.74□□□□□ -0.53
SftpbP50405 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.74□□□□□ -0.53
SftpbP50405 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
SftpbP50405 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Gm38317-201ENSMUST00000195564 343 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Gm44364-201ENSMUST00000198368 141 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.74□□□□□ -0.53
SftpbP50405 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Gm44967-201ENSMUST00000207047 631 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Gm4157-201ENSMUST00000211647 679 ntBASIC11.74□□□□□ -0.53
SftpbP50405 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SftpbP50405 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SftpbP50405 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SftpbP50405 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.74□□□□□ -0.53
SftpbP50405 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SftpbP50405 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SftpbP50405 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SftpbP50405 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SftpbP50405 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms