Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdx2P43241 Gm18801-201ENSMUST00000186616 536 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdx2P43241 Gm38314-201ENSMUST00000195709 625 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 Gm42430-201ENSMUST00000197209 616 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.95□□□□□ -0.66
Cdx2P43241 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 Gm7525-201ENSMUST00000219425 454 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdx2P43241 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdx2P43241 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.95□□□□□ -0.66
Cdx2P43241 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx2P43241 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx2P43241 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Cdx2P43241 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx2P43241 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Gm14234-201ENSMUST00000119539 845 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx2P43241 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Gm29067-201ENSMUST00000190821 470 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 Gm37852-201ENSMUST00000193027 350 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 Gm9369-201ENSMUST00000196009 733 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 Gm42433-201ENSMUST00000196806 940 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 Gm2594-201ENSMUST00000214774 742 ntBASIC10.94□□□□□ -0.66
Cdx2P43241 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdx2P43241 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdx2P43241 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdx2P43241 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx2P43241 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdx2P43241 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdx2P43241 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx2P43241 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Cdx2P43241 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm25148-201ENSMUST00000104611 123 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdx2P43241 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms