Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
TfamP40630 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
TfamP40630 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TfamP40630 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
TfamP40630 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.15□□□□□ -0.62
TfamP40630 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.15□□□□□ -0.62
TfamP40630 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
TfamP40630 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.15□□□□□ -0.62
TfamP40630 Gm11500-201ENSMUST00000118237 601 ntBASIC11.15□□□□□ -0.62
TfamP40630 Gm13996-201ENSMUST00000118456 430 ntBASIC11.15□□□□□ -0.62
TfamP40630 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Gm17376-201ENSMUST00000166016 84 ntBASIC11.15□□□□□ -0.62
TfamP40630 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.15□□□□□ -0.62
TfamP40630 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.15□□□□□ -0.62
TfamP40630 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
TfamP40630 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.15□□□□□ -0.62
TfamP40630 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TfamP40630 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
TfamP40630 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
TfamP40630 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
TfamP40630 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
TfamP40630 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.14□□□□□ -0.63
TfamP40630 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Gm25668-201ENSMUST00000157700 129 ntBASIC11.14□□□□□ -0.63
TfamP40630 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Gm28686-201ENSMUST00000187404 609 ntBASIC11.14□□□□□ -0.63
TfamP40630 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.14□□□□□ -0.63
TfamP40630 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Gm26448-201ENSMUST00000082446 203 ntBASIC11.14□□□□□ -0.63
TfamP40630 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.14□□□□□ -0.63
TfamP40630 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.14□□□□□ -0.63
TfamP40630 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TfamP40630 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TfamP40630 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TfamP40630 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms