Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.85□□□□□ -0.51
Cxcl12P40224 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl12P40224 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.84□□□□□ -0.51
Cxcl12P40224 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Snord23-201ENSMUST00000116828 109 ntBASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm14071-201ENSMUST00000117817 509 ntBASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm12986-201ENSMUST00000119037 967 ntBASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl12P40224 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl12P40224 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl12P40224 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cxcl12P40224 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.84□□□□□ -0.51
Cxcl12P40224 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm18065-201ENSMUST00000221395 526 ntBASIC11.84□□□□□ -0.51
Cxcl12P40224 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.84□□□□□ -0.51
Cxcl12P40224 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.84□□□□□ -0.51
Cxcl12P40224 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcl12P40224 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcl12P40224 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl12P40224 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl12P40224 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcl12P40224 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cxcl12P40224 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 Gm6518-201ENSMUST00000208450 342 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms