Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rom1P32958 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Rom1P32958 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Rom1P32958 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rom1P32958 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.09□□□□□ -0.95
Rom1P32958 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.09□□□□□ -0.95
Rom1P32958 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Rom1P32958 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Gm13875-201ENSMUST00000120162 282 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Gm11660-201ENSMUST00000120955 412 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.09□□□□□ -0.95
Rom1P32958 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.09□□□□□ -0.95
Rom1P32958 Gm26047-201ENSMUST00000157308 113 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Gm25043-201ENSMUST00000158604 212 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Gm26047-202ENSMUST00000198840 115 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Gm9908-201ENSMUST00000211534 448 ntBASIC9.09□□□□□ -0.95
Rom1P32958 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.09□□□□□ -0.95
Rom1P32958 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.09□□□□□ -0.95
Rom1P32958 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rom1P32958 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rom1P32958 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rom1P32958 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rom1P32958 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.09□□□□□ -0.96
Rom1P32958 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.96
Rom1P32958 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rom1P32958 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Gm13297-201ENSMUST00000120205 934 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Gm16177-201ENSMUST00000120728 718 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rom1P32958 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.08□□□□□ -0.96
Rom1P32958 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Gm23984-201ENSMUST00000157139 203 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.08□□□□□ -0.96
Rom1P32958 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.08□□□□□ -0.96
Rom1P32958 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Gm9230-201ENSMUST00000188228 532 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms