Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.89□□□□□ -0.67
TP20293 Gm16505-201ENSMUST00000179981 232 ntBASIC10.89□□□□□ -0.67
TP20293 Gm27552-201ENSMUST00000183351 62 ntBASIC10.89□□□□□ -0.67
TP20293 Gm27844-201ENSMUST00000183613 62 ntBASIC10.89□□□□□ -0.67
TP20293 AU022133-201ENSMUST00000200601 873 ntBASIC10.89□□□□□ -0.67
TP20293 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.89□□□□□ -0.67
TP20293 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.89□□□□□ -0.67
TP20293 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
TP20293 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TP20293 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.89□□□□□ -0.67
TP20293 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.89□□□□□ -0.67
TP20293 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
TP20293 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
TP20293 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TP20293 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.88□□□□□ -0.67
TP20293 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.88□□□□□ -0.67
TP20293 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TP20293 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Gm8566-201ENSMUST00000120174 465 ntBASIC10.88□□□□□ -0.67
TP20293 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TP20293 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.88□□□□□ -0.67
TP20293 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.88□□□□□ -0.67
TP20293 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
TP20293 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.88□□□□□ -0.67
TP20293 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
TP20293 Gm4310-201ENSMUST00000177847 889 ntBASIC10.88□□□□□ -0.67
TP20293 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.88□□□□□ -0.67
TP20293 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.88□□□□□ -0.67
TP20293 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.88□□□□□ -0.67
TP20293 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.88□□□□□ -0.67
TP20293 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.88□□□□□ -0.67
TP20293 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TP20293 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.87□□□□□ -0.67
TP20293 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.87□□□□□ -0.67
TP20293 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TP20293 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
TP20293 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
TP20293 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
TP20293 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
TP20293 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.87□□□□□ -0.67
TP20293 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
TP20293 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
TP20293 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
TP20293 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TP20293 Gm4909-201ENSMUST00000118749 794 ntBASIC10.87□□□□□ -0.67
TP20293 Gm25881-201ENSMUST00000157783 103 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms