Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.92□□□□□ -0.5
Rb1P13405 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.92□□□□□ -0.5
Rb1P13405 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.92□□□□□ -0.5
Rb1P13405 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rb1P13405 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.91□□□□□ -0.5
Rb1P13405 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rb1P13405 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Gm12795-201ENSMUST00000117594 539 ntBASIC11.91□□□□□ -0.5
Rb1P13405 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.91□□□□□ -0.5
Rb1P13405 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.91□□□□□ -0.5
Rb1P13405 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Gm7593-201ENSMUST00000187246 644 ntBASIC11.91□□□□□ -0.5
Rb1P13405 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.91□□□□□ -0.5
Rb1P13405 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.91□□□□□ -0.5
Rb1P13405 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.91□□□□□ -0.5
Rb1P13405 Gm26035-201ENSMUST00000083065 308 ntBASIC11.91□□□□□ -0.5
Rb1P13405 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.91□□□□□ -0.5
Rb1P13405 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rb1P13405 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Rb1P13405 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rb1P13405 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.91□□□□□ -0.5
Rb1P13405 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.9□□□□□ -0.5
Rb1P13405 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.9□□□□□ -0.5
Rb1P13405 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Rb1P13405 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.9□□□□□ -0.5
Rb1P13405 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rb1P13405 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rb1P13405 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.9□□□□□ -0.5
Rb1P13405 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Rb1P13405 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rb1P13405 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.9□□□□□ -0.5
Rb1P13405 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.9□□□□□ -0.5
Rb1P13405 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Gm9630-201ENSMUST00000178304 885 ntBASIC11.9□□□□□ -0.5
Rb1P13405 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rb1P13405 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.9□□□□□ -0.5
Rb1P13405 Gm18711-201ENSMUST00000199341 750 ntBASIC11.9□□□□□ -0.5
Rb1P13405 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.9□□□□□ -0.5
Rb1P13405 Gm9463-201ENSMUST00000206707 601 ntBASIC11.9□□□□□ -0.5
Rb1P13405 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.9□□□□□ -0.5
Rb1P13405 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.9□□□□□ -0.5
Rb1P13405 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.9□□□□□ -0.5
Rb1P13405 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.9□□□□□ -0.5
Rb1P13405 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Rb1P13405 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rb1P13405 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms