Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm26976-201ENSMUST00000182929 908 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm42430-201ENSMUST00000197209 616 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm44008-201ENSMUST00000204345 412 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl3P10855 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ccl3P10855 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ccl3P10855 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.16□□□□□ -0.78
Ccl3P10855 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Ccl3P10855 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.16□□□□□ -0.78
Ccl3P10855 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl3P10855 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl3P10855 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Ccl3P10855 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.15□□□□□ -0.78
Ccl3P10855 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Ccl3P10855 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Ccl3P10855 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm14234-201ENSMUST00000119539 845 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Gm13019-201ENSMUST00000120000 276 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Gm13284-201ENSMUST00000121020 547 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm17221-201ENSMUST00000163909 481 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm17073-201ENSMUST00000168069 556 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm20414-201ENSMUST00000172918 646 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm30946-201ENSMUST00000198288 724 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Gm8255-201ENSMUST00000218693 305 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.15□□□□□ -0.78
Ccl3P10855 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.15□□□□□ -0.78
Ccl3P10855 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.15□□□□□ -0.78
Ccl3P10855 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Ccl3P10855 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl3P10855 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Ccl3P10855 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.15□□□□□ -0.79
Ccl3P10855 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Ccl3P10855 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ccl3P10855 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ccl3P10855 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Ccl3P10855 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ccl3P10855 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
Ccl3P10855 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
Ccl3P10855 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms