Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm11979-201ENSMUST00000119629 743 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.61□□□□□ -0.23
Col3a1P08121 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Col3a1P08121 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.61□□□□□ -0.23
Col3a1P08121 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.61□□□□□ -0.23
Col3a1P08121 Gm26670-202ENSMUST00000226862 340 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.61□□□□□ -0.23
Col3a1P08121 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col3a1P08121 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col3a1P08121 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.6□□□□□ -0.23
Col3a1P08121 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col3a1P08121 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.6□□□□□ -0.23
Col3a1P08121 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.6□□□□□ -0.23
Col3a1P08121 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.6□□□□□ -0.23
Col3a1P08121 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.6□□□□□ -0.23
Col3a1P08121 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.6□□□□□ -0.23
Col3a1P08121 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.6□□□□□ -0.23
Col3a1P08121 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.6□□□□□ -0.23
Col3a1P08121 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.6□□□□□ -0.23
Col3a1P08121 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.6□□□□□ -0.23
Col3a1P08121 Gm22146-201ENSMUST00000157397 288 ntBASIC13.6□□□□□ -0.23
Col3a1P08121 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.6□□□□□ -0.23
Col3a1P08121 Capsl-202ENSMUST00000226688 739 ntBASIC13.6□□□□□ -0.23
Col3a1P08121 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.6□□□□□ -0.23
Col3a1P08121 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Col3a1P08121 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col3a1P08121 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col3a1P08121 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col3a1P08121 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Col3a1P08121 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.59□□□□□ -0.23
Col3a1P08121 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Col3a1P08121 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Gm23612-201ENSMUST00000103823 110 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Gm14165-201ENSMUST00000121456 952 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Col3a1P08121 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.59□□□□□ -0.23
Col3a1P08121 Gm23576-201ENSMUST00000179918 110 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.59□□□□□ -0.23
Col3a1P08121 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.59□□□□□ -0.23
Col3a1P08121 Mir7035-201ENSMUST00000184713 82 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Gm34379-201ENSMUST00000195036 290 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Gm6423-201ENSMUST00000204315 934 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Gm9487-201ENSMUST00000216600 472 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Gm8255-201ENSMUST00000218693 305 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Gm5178-201ENSMUST00000219380 898 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.59□□□□□ -0.23
Col3a1P08121 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col3a1P08121 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col3a1P08121 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.59□□□□□ -0.23
Col3a1P08121 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col3a1P08121 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col3a1P08121 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col3a1P08121 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col3a1P08121 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms