Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Rnf13O54965 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf13O54965 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf13O54965 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf13O54965 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf13O54965 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf13O54965 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf13O54965 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Rnf13O54965 Gm12957-201ENSMUST00000117835 377 ntBASIC10.42□□□□□ -0.74
Rnf13O54965 Gm11222-201ENSMUST00000119005 738 ntBASIC10.42□□□□□ -0.74
Rnf13O54965 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.42□□□□□ -0.74
Rnf13O54965 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rnf13O54965 Gm6963-201ENSMUST00000147879 379 ntBASIC10.42□□□□□ -0.74
Rnf13O54965 Gm17420-201ENSMUST00000164753 153 ntBASIC10.42□□□□□ -0.74
Rnf13O54965 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.42□□□□□ -0.74
Rnf13O54965 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.42□□□□□ -0.74
Rnf13O54965 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.42□□□□□ -0.74
Rnf13O54965 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.42□□□□□ -0.74
Rnf13O54965 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.42□□□□□ -0.74
Rnf13O54965 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Btrc-209ENSMUST00000224478 2194 ntBASIC10.42□□□□□ -0.74
Rnf13O54965 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.42□□□□□ -0.74
Rnf13O54965 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf13O54965 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Rnf13O54965 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rnf13O54965 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.41□□□□□ -0.74
Rnf13O54965 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm12742-201ENSMUST00000117326 410 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Gm12241-201ENSMUST00000118330 726 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Gm11660-201ENSMUST00000120955 412 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Gzmn-202ENSMUST00000225535 989 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.41□□□□□ -0.74
Rnf13O54965 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf13O54965 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Rnf13O54965 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf13O54965 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Rnf13O54965 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf13O54965 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms