Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npc1O35604 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Npc1O35604 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Npc1O35604 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Npc1O35604 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Npc1O35604 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Npc1O35604 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Npc1O35604 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.26□□□□□ -0.61
Npc1O35604 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.26□□□□□ -0.61
Npc1O35604 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Gm12407-201ENSMUST00000180219 324 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Gm7467-201ENSMUST00000185173 652 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Gm3508-201ENSMUST00000186012 792 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.26□□□□□ -0.61
Npc1O35604 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Gm45113-201ENSMUST00000207518 165 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.26□□□□□ -0.61
Npc1O35604 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.26□□□□□ -0.61
Npc1O35604 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Npc1O35604 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.26□□□□□ -0.61
Npc1O35604 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.26□□□□□ -0.61
Npc1O35604 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Npc1O35604 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npc1O35604 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.25□□□□□ -0.61
Npc1O35604 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Gm3150-201ENSMUST00000166418 204 ntBASIC11.25□□□□□ -0.61
Npc1O35604 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.25□□□□□ -0.61
Npc1O35604 Gm45550-201ENSMUST00000209380 946 ntBASIC11.25□□□□□ -0.61
Npc1O35604 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Npc1O35604 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Gm10179-201ENSMUST00000086233 688 ntBASIC11.25□□□□□ -0.61
Npc1O35604 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Npc1O35604 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Npc1O35604 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Npc1O35604 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npc1O35604 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Npc1O35604 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npc1O35604 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Npc1O35604 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms